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Raghu Machiraju

  • Professor, SBS-Biomedical Informatics
  • Professor, Pathology
  • Professor, Computer Science & Engineering
  • IntDir of Data Analyt Collabor, Translational Data Analytics
  • 779 Dreese Laboratories
    2015 Neil Ave
    Columbus, OH 43210
  • 614-292-6730

Journal Articles

2015

  • Myers,Emma,M; Bartlett,Christopher,W; Machiraju,Raghu; Bohland,Jason,W, 2015, "An integrative analysis of regional gene expression profiles in the human brain." METHODS 73, 54-70 - 54-70.
  • Ding H, Wang C, Huang K, Machiraju R., 2015, "GRAPHIE: graph based histology image explorer." . BMC Bioinformatics. 2015 Suppl 11, no. S10, 1186 - 1186.

2014

  • Wang,Chao; Machiraju,Raghu; Huang,Kun, 2014, "Breast cancer patient stratification using a molecular regularized consensus clustering method." METHODS 67, no. 3, 304-312 - 304-312.
  • Yates,A; Webb,A; Sharpnack,M; Chamberlin,H; Huang,K; Machiraju,R, 2014, "Visualizing Multidimensional Data with Glyph SPLOMs." COMPUTER GRAPHICS FORUM 33, no. 3, 301-310 - 301-310.
  • Li Q, Zachmann G, David F, Huang K, Machiraju R, 2014, "Observing Genomics and Phenotypical Patterns in the Developing Mouse Brain." IEEE Computer Graphics and Applications 4, 88-97 - 88-97.

2013

  • Wolock,Samuel,L; Yates,Andrew; Petrill,Stephen,A; Bohland,Jason,W; Blair,Clancy; Li,Ning; Machiraju,Raghu; Huang,Kun; Bartlett,Christopher,W, 2013, "Gene X smoking interactions on human brain gene expression: finding common mechanisms in adolescents and adults." JOURNAL OF CHILD PSYCHOLOGY AND PSYCHIATRY 54, no. 10, 1109-1119 - 1109-1119.
  • Kalluru V, Machiraju R, Huang K., 2013, "Identify condition-specific gene co-expression networks.." Int J Comput Biol Drug Design 6, no. 1-2, 50-59 - 50-59.
  • Wang C, Pecot T, Zynger D, Shapiro C, Machiraju R, Huang K, 2013, Identifying Survival Associated Morphological Features of Triple Negative Breast Cancer using Multiple Datasets. Journal of the American Medical Informatics Association : JAMIA. Epub: http://jamia.bmj.com/content/early/2013/04/11/amiajnl-2012-001538, no. NA, NA - NA.

2011

  • Singh, S.; Janoos, F.; Pécot, T.; Caserta, E. et al., 2011, "Identifying nuclear phenotypes using semi-supervised metric learning.." Information processing in medical imaging : proceedings of the ... conference 22, 398-410 - 398-410.
  • Janoos, F.; Singh, S.; Machiraju, R.; Wells, W.M. et al., 2011, "State-space models of mental processes from fMRI.." Information processing in medical imaging : proceedings of the ... conference 22, 588-599 - 588-599.
  • Rink,Cameron; Christoforidis,Greg; Khanna,Savita; Peterson,Laura; Patel,Yojan; Khanna,Suchin; Abduljalil,Amir; Irfanoglu,Okan; Machiraju,Raghu; Bergdall,Valerie,K; Sen,Chandan,K, 2011, "Tocotrienol vitamin E protects against preclinical canine ischemic stroke by inducing arteriogenesis." JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM 31, no. 11, 2218-2230 - 2218-2230.
  • Sammet,Steffen; Evans,Kevin,D; Irfanoglu,M,Okan; Strapp,Ashley; Machiraju,Raghu, 2011, "THE FEASIBILITY OF HYBRID AUTOMATIC SEGMENTATION OF AXILLARY LYMPH NODES FROM A 3-D SONOGRAM." ULTRASOUND IN MEDICINE AND BIOLOGY 37, no. 12, 2075-2085 - 2075-2085.

2008

  • Mosaliganti,Kishore; Pan,Tony; Ridgway,Randall; Sharp,Richard; Cooper,Lee; Gulacy,Alex; Sharma,Ashish; Irfanoglu,Okan; Machiraju,Raghu; Kurc,Tahsin; de Bruin,Alain; Wenzel,Pamela; Leone,Gustavo; Saltz,Joel; Huang,Kun, 2008, "An imaging workflow for characterizing phenotypical change in large histological mouse model datasets." JOURNAL OF BIOMEDICAL INFORMATICS 41, no. 6, 863-873 - 863-873.

2007

  • Mosaliganti,Kishore; Janoos,Firdaus; Sharp,Richard; Ridgway,Randall; Machiraju,Raghu; Huang,Kun; Wenzel,Pamela; deBruin,Alain; Leone,Gustavo; Saltz,Joel, 2007, "Detection and visualization of surface-pockets to enable phenotyping studies." IEEE TRANSACTIONS ON MEDICAL IMAGING 26, no. 9, 1283-1290 - 1283-1290.
  • Wenzel,Pamela,L; Wu,Lizhao; de Bruin,Alain; Chong,Jean-Leon; Chen,Wen-Yi; Dureska,Geoffrey; Sites,Emily; Pan,Tony; Sharma,Ashish; Huang,Kun; Ridgway,Randall; Mosaliganti,Kishore; Sharp,Richard; Machiraju,Raghu; Saltz,Joel; Yamamoto,Hideyuki; Cross,James,C; Robinson,Michael,L; Leone,Gustavo, 2007, "Rb is critical in a mammalian tissue stem cell population." GENES & DEVELOPMENT 21, no. 1, 85-97 - 85-97.
  • Kaur, R.; Machiraju, R.; Nigam, K.D.P., 2007, "Agitation effects in a gas-liquid-liquid reactor system: Methyl ethyl ketazine production." International Journal of Chemical Reactor Engineering 5,
  • Sharp,Richard,P; Ridgway,Randall; Mosaliganti,Kishore; Wenzel,Pamela; Pan,Tony; de Bruin,Alain; Machiraju,Raghu; Huang,Kun; Leone,Gustavo; Saltz,Joel,H, 2007, "Volume rendering phenotype differences in mouse placenta microscopy data." COMPUTING IN SCIENCE & ENGINEERING 9, no. 1, 38-47 - 38-47.

Papers in Proceedings

2018

  • Agarwal, M.; Narcisse, D.; Khouzam, N.; Khouzam, R. "Foreword." (2 2018).
  • Agarwal, M.; Narcisse, D.; Khouzam, N.; Khouzam, R. "Foreword." (2 2018).

2016

  • Meng, N.; Machiraju, R.; Huang, K. "Identification of recurrent combinatorial patterns of chromatin modifications at promoters across various tissue types.." (12 2016).
  • Meng, N.; Machiraju, R.; Huang, K. "Identification of recurrent combinatorial patterns of chromatin modifications at promoters across various tissue types." (12 2016).
  • Meng, N.; Machiraju, R.; Huang, K. "Identification of recurrent combinatorial patterns of chromatin modifications at promoters across various tissue types.." (12 2016).
  • Meng, N.; Machiraju, R.; Huang, K. "Identification of recurrent combinatorial patterns of chromatin modifications at promoters across various tissue types." (12 2016).
  • Meng, N.; Machiraju, R.; Huang, K. "Identification of recurrent combinatorial patterns of chromatin modifications at promoters across various tissue types." in 27th International Conference on Genome Informatics - Bioinformatics. (12 2016).

2015

  • Biswas, A.; Thompson, D.; He, W.; Deng, Q. et al. "An uncertainty-driven approach to vortex analysis using oracle consensus and spatial proximity." (1 2015).
  • *Ji, X.; Machiraju, R.; Ritter, A.; Yen, P-Y. "Examining the Distribution, Modularity, and Community Structure in Article Networks for Systematic Reviews." in AMIA. (1 2015).
  • Ayan Biswas, David Thompson, Wenbin He, Qi Deng, Chun-Ming Chen, Han-Wei Shen, Raghu Machiraju, and Anand Rangarajan "An Uncertainty-Driven Approach to Vortex Analysis Using Oracle Consensus and Spatial Proximity." in Pacific Visualization 2015. (4 2015).
  • Biswas, A.; Thompson, D.; He, W.; Deng, Q. et al. "An Uncertainty-Driven Approach to Vortex Analysis Using Oracle Consensus and Spatial Proximity." (1 2015).
  • Ji, X.; Machiraju, R.; Ritter, A.; Yen, P-Y. "Examining the Distribution, Modularity, and Community Structure in Article Networks for Systematic Reviews.." (1 2015).
  • Ji, X.; Machiraju, R.; Ritter, A.; Yen, P-Y. "Examining the Distribution, Modularity, and Community Structure in Article Networks for Systematic Reviews.." (1 2015).
  • Biswas, A.; Thompson, D.; He, W.; Deng, Q. et al. "An Uncertainty-Driven Approach to Vortex Analysis Using Oracle Consensus and Spatial Proximity." in IEEE Pacific Visualization Symposium (PacificVis). (1 2015).
  • Ji, X.; Machiraju, R.; Ritter, A.; Yen, P-Y. "Examining the Distribution, Modularity, and Community Structure in Article Networks for Systematic Reviews.." (1 2015).
  • Ji, X.; Machiraju, R.; Ritter, A.; Yen, P.Y. "Examining the Distribution, Modularity, and Community Structure in Article Networks for Systematic Reviews." (1 2015).

2014

  • Wang C, Machiraju R, Huang K "Cancer Patient Integrative Stratification via a Two-step Consensus Clustering of Molecular Expression and Clinical Attributes.." in 2014 AMIA (American Medical Informatics Association) Summit on Translational Bioinformatics,. (4 2014).
  • Zhang, L.; Machiraju, R.; Thompson, D.; Rangarajan, A. et al. "Adaptive boosting for enhanced vortex visualization." (1 2014).

2013

  • Park D-Y, Jones D, Moldovan N, Machiraju R, Pécot T "Robust Detection and Visualization of 
Cytoskeletal Structures in Fibrillar Scaffolds from 3-Dimensional Confocal Images." in IEEE Symposium 
on Biological Data Visualization (BioVis) 2013,. (10 2013).
  • Zhang, L.; Machiraju, R.; Thompson, D.; IEEE, "CAVIAR-Based Vortex Core Region Detection." (1 2013).
  • Zhang, L.; Machiraju, R.; Thompson, D. "CAVIAR-Based Vortex Core Region Detection." in 13th International Conference on Computer-Aided Design and Computer Graphics (CAD/Graphics). (1 2013).
  • Zhang, L.; Machiraju, R.; Thompson, D. "CAVIAR-based vortex core region detection." (1 2013).
  • Park, D.Y.; Jones, D.; Moldovan, N.I.; Machiraju, R. et al. "Robust detection and visualization of cytoskeletal structures in fibrillar scaffolds from 3-dimensional confocal image." (1 2013).

2012

  • Pecot, T.; Singh, S.; Caserta, E.; Huang, K. et al. "NON PARAMETRIC CELL NUCLEI SEGMENTATION BASED ON A TRACKING OVER DEPTH FROM 3D FLUORESCENCE CONFOCAL IMAGES." in 9th IEEE International Symposium on Biomedical Imaging (ISBI) - From Nano to Macro. (1 2012).
  • Han, Z.; Tian, L.; Pecot, T.; Huang, T. et al. "A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data." in 1st Annual Meeting of the Great Lakes Bioinformatics (GLBIO). (3 2012).
  • Pecot, T.; Singh, S.; Caserta, E.; Huang, K. et al. "Non parametric cell nuclei segmentation based on a tracking over depth from 3D fluorescence confocal images." (8 2012).
  • Pecot,Thierry; Singh,Shantanu; Caserta,Enrico; Huang,Kun; Machiraju,Raghu; Leone,Gustavo "NON PARAMETRIC CELL NUCLEI SEGMENTATION BASED ON A TRACKING OVER DEPTH FROM 3D FLUORESCENCE CONFOCAL IMAGES." in 9th IEEE International Symposium on Biomedical Imaging (ISBI) - From Nano to Macro. (1 2012).
  • Han, Z.; Tian, L.; Pécot, T.; Huang, T. et al. "A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data." (1 2012).
  • Machiraju, R.; Singh, S.; Pecot, T.; Huang, K. et al. "Quantitative Cellular Phenotyping in Tissue Microenvironments." in Experimental Biology Meeting. (4 2012).
  • Han, Z.; Tian, L.; Pécot, T.; Huang, T. et al. "A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data.." (3 2012).
  • Zhang, L.; Meng, X.; Machiraju, R.; Thompson, D. "Distance measure in vortex visualization." (10 2012).
  • Han, Z.; Tian, L.; Pecot, T.; Huang, T. et al. "A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data." (3 2012).
  • Han, Z.; Tian, L.; Pécot, T.; Huang, T. et al. "A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data.." (12 2012).
  • Machiraju, R.; Singh, S.; Pecot, T.; Huang, K. et al. "Quantitative Cellular Phenotyping in Tissue Microenvironments." (4 2012).
  • Han,Zhi; Tian,Lu; Pecot,Thierry; Huang,Tim; Machiraju,Raghu; Huang,Kun "A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data." in 1st Annual Meeting of the Great Lakes Bioinformatics (GLBIO). (3 2012).
  • Pecot, T.; Singh, S.; Caserta, E.; Huang, K. et al. "NON PARAMETRIC CELL NUCLEI SEGMENTATION BASED ON A TRACKING OVER DEPTH FROM 3D FLUORESCENCE CONFOCAL IMAGES." (1 2012).
  • Han, Z.; Tian, L.; Pécot, T.; Huang, T. et al. "A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data.." (3 2012).

2011

  • Singh, S.; Janoos, F.; Pécot, T.; Caserta, E. et al. "Non-parametric population analysis of cellular phenotypes." (10 2011).
  • Irfanoglu,M,O; Walker,L; Sammet,S; Pierpaoli,C; Machiraju,R "Susceptibility Distortion Correction for Echo Planar Images with Non-uniform B-Spline Grid Sampling: A Diffusion Tensor Image Study." in 14th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2011). (9 2011).
  • Singh,Shantanu; Janoos,Firdaus; Pecot,Thierry; Caserta,Enrico; Huang,Kun; Rittscher,Jens; Leone,Gustavo; Machiraju,Raghu "Non-parametric Population Analysis of Cellular Phenotypes." in 14th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2011). (9 2011).
  • Janoos,Firdaus; Singh,Shantanu; Machiraju,Raghu; Wells,William,M; Morocz,Istvan,A "State-Space Models of Mental Processes from fMRI." in 22nd International Conference on Information Processing in Medical Imaging (IPMI). (7 2011).
  • Singh,Shantanu; Janoos,Firdaus; Pecot,Thierry; Caserta,Enrico; Leone,Gustavo; Rittscher,Jens; Machiraju,Raghu "Identifying Nuclear Phenotypes Using Semi-supervised Metric Learning." in 22nd International Conference on Information Processing in Medical Imaging (IPMI). (1 2011).
  • Irfanoglu, M.O.; Walker, L.; Sammet, S.; Pierpaoli, C. et al. "Susceptibility distortion correction for echo planar images with non-uniform B-spline grid sampling: A diffusion tensor image study." (10 2011).

2010

  • Sammet,S; Irfanoglu,O; Koch,R; Schmalbrock,P; Choi,S; Machiraju,R; Yuh,W; Knopp,M "Diffusion Tensor Imaging and Fibertracking at 7T." in 110th Annual Meeting of the American-Roentgen-Ray-Society. (5 2010).
  • Singh, S.; Raman, S.; Caserta, E.; Leone, G. et al. "ANALYSIS OF SPATIAL VARIATION OF NUCLEAR MORPHOLOGY IN TISSUE MICROENVIRONMENTS." (1 2010).
  • Janoos F, Irfanoglu O, Afacan O, Machiraju R, Warfield S, Wald L, Morocz I "Brain State Identification from fMRI Using Unsupervised Learning." in Proceedings of Human Brain Mapping. (1 2010).
  • Mosaliganti K, Janoos F, Gelas A, Noche R, Obholzer N, Machiraju R, Megason S "Anisotropic Plate Diffusion Filtering for Detection of Cell Membranes in 3D Microscopy Images." in The IEEE International Symposium on Biomedical Imaging (ISBI) 2010. (4 2010).
  • Mosaliganti, K.; Janoos, F.; Gelas, A.; Noche, R. et al. "Anisotropic plate diffusion filtering for detection of cell membranes in 3D microscopy images." (8 2010).
  • Janoos, F.; Machiraju, R.; Morocz, I.A. "Decoding brain states from fMRI data." (9 2010).
  • Mosaliganti, K.; Janoos, F.; Gelas, A.; Noche, R. et al. "ANISOTROPIC PLATE DIFFUSION FILTERING FOR DETECTION OF CELL MEMBRANES IN 3D MICROSCOPY IMAGES.." (1 2010).
  • Mosaliganti, K.; Janoos, F.; Gelas, A.; Noche, R. et al. "ANISOTROPIC PLATE DIFFUSION FILTERING FOR DETECTION OF CELL MEMBRANES IN 3D MICROSCOPY IMAGES.." (1 2010).
  • Janoos,Firdaus; Machiraju,Raghu; Morocz,Istvan,A "Decoding brain states from fMRI data." in 15th World Congress of Psychophysiology. (9 2010).
  • Botha, C.; Hornegger, J.; Machiraju, R.; Wiebel, A. et al. "Foreword." (12 2010).
  • Janoos,Firdaus; Machiraju,Raghu; Sammet,Steffen; Knopp,Michael,V; Warfield,Simon,K; Morocz,Istvan,Akos "Measuring Effects of Latency in Brain Activity with FMRI." in 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro. (1 2010).
  • F.Janoos, R. Machiraju, S. Sammet, M.V. Knopp and I.A. Morocz "Unsupervised Learning of Brain States from fMRI Data." in 3th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI) Conference, 2010. (1 2010).
  • Singh, S.; Raman, S.; Caserta, E.; Leone, G. et al. "ANALYSIS OF SPATIAL VARIATION OF NUCLEAR MORPHOLOGY IN TISSUE MICROENVIRONMENTS." in 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro. (1 2010).
  • Mosaliganti, K.; Janoos, F.; Gelas, A.; Noche, R. et al. "ANISOTROPIC PLATE DIFFUSION FILTERING FOR DETECTION OF CELL MEMBRANES IN 3D MICROSCOPY IMAGES." in 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro. (1 2010).
  • Singh,S; Raman,S; Caserta,E; Leone,G; Ostrowski,M; Rittscher,J; Machiraju,R "ANALYSIS OF SPATIAL VARIATION OF NUCLEAR MORPHOLOGY IN TISSUE MICROENVIRONMENTS." in 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro. (1 2010).
  • Mosaliganti, K.; Janoos, F.; Gelas, A.; Noche, R. et al. "ANISOTROPIC PLATE DIFFUSION FILTERING FOR DETECTION OF CELL MEMBRANES IN 3D MICROSCOPY IMAGES." (1 2010).
  • Irfanoglu M, Koay G, Basser P, Machiraju R "Diffusion Tensor Field Registration in the Presence of Uncertainty." in Medical Image Computing and Computer Assisted Intervention Conference (MICCAI) 2009. (1 2010).
  • Singh, S.; Raman, S.; Caserta, E.; Leone, G. et al. "Analysis of spatial variation of nuclear morphology in tissue microenvironments." (8 2010).
  • Singh S, Raman S, Caserta E, Leone G, Ostrowski M, Rittscher J, Machiraju R "Analysis of Spatial Variation of Nuclear Morphology in Tissue Microenviroments." in International Symposium on Biological Imaging, Rotterdam, The Netherlands, April 2010 (to appear).. (1 2010).
  • Janoos, F.; Machiraju, R.; Morocz, I.A. "Decoding brain states from fMRI data." in 15th World Congress of Psychophysiology. (9 2010).

2009

  • Janoos,Firdaus; Mosaliganti,Kishore; Xu,Xiaoyin; Machiraju,Raghu; Huang,Kun; Wong,Stephen,TC "Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging." in 1st International Workshop on Microscopy Image Analysis with Applications to Biology. (2 2009).
  • Janoos, F.; Mosaliganti, K.; Xu, X.; Machiraju, R. et al. "Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging." in 1st International Workshop on Microscopy Image Analysis with Applications to Biology. (2 2009).
  • Janoos, F.; Mosaliganti, K.; Xu, X.; Machiraju, R. et al. "Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging." (2 2009).
  • Janoos, F.; Mosaliganti, K.; Xu, X.; Machiraju, R. et al. "Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging.." (2 2009).
  • Janoos, F.; Mosaliganti, K.; Xu, X.; Machiraju, R. et al. "Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging.." (2 2009).
  • Janoos,Firdaus; Nouanesengsy,Boonthanome; Machiraju,Raghu; Shen,Han,Wei; Sammet,Steffen; Knopp,Michael; Morocz,Istvan,A "Visual Analysis of Brain Activity from fMRI Data." in 11th Eurographics/IEEE VGTC Symposium on Visualization (EuroVis 09). (6 2009).
  • Irfanoglu, M.O.; Koay, C.G.; Pajevic, S.; Machiraju, R. et al. "Diffusion tensor field registration in the presence of uncertainty." (12 2009).
  • Janoos, F.; Mosaliganti, K.; Xu, X.; Machiraju, R. et al. "Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging." (2 2009).

2008

  • Janoos, F.; Nouansengsy, B.; Xu, X.; MacHiraju, R. et al. "Classification and uncertainty visualization of dendritic spines from optical microscopy imaging." (5 2008).
  • Singh, S.; Mosaliganti, K.; Machiraju, R. "Microstructure preserving synthesis of biomedical images." (9 2008).
  • Janoos, F.; Nouansengsy, B.; Xu, X.; Machiraju, R. et al. "Classification and uncertainty visualization of dendritic spines from optical microscopy imaging." in 10th Eurographics/IEEE VGTC Symposium on Visualization (EuroVis 08). (5 2008).
  • Mosaliganti, K.; Machiraju, R.; Huang, K. "Geometry-driven visualization of microscopic structures in biology." in 5th IEEE International Symposium on Biomedical Imaging. (1 2008).
  • Singh, S.; Mosaliganti, K.; Machiraju, R. "Microstructure preserving synthesis of biomedical images." in 5th IEEE International Symposium on Biomedical Imaging. (1 2008).
  • Mosaliganti, K.; Machiraju, R.; Huang, K. "Geometry-driven visualization of microscopic structures in biology." (9 2008).
  • Janoos, F.; Nouansengsy, B.; Xu, X.; Machiraju, R. et al. "Classification and uncertainty visualization of dendritic spines from optical microscopy imaging." (5 2008).
  • Mosaliganti,K; Machiraju,R; Huang,K "Geometry-driven visualization of microscopic structures in biology." in 5th IEEE International Symposium on Biomedical Imaging. (4 2008).
  • Mosaliganti, K.; Machiraju, R.; Huang, K.; IEEE, "Geometry-driven visualization of microscopic structures in biology." (1 2008).
  • Singh, S.; Mosaliganti, K.; Machiraju, R.; IEEE, "Microstructure preserving synthesis of biomedical images." (1 2008).
  • Jankun-Kelly, M.; Thompson, D.; Jiang, M.; Shannahan, B. et al. "Vortex characterization for engineering applications." (12 2008).

2007

  • Janoos, F.; Singh, S.; Irfanoglu, O.; Machiraju, R. et al. "Activity analysis using spatio-temporal trajectory volumes in surveillance applications." (12 2007).
  • Janoos, F.; Machiraju, R.; Parent, R.; Davis, J.W. et al. "Sensor configuration for coverage optimization for surveillance applications." (5 2007).
  • Janoos, F.; Machiraju, R.; Parent, R.; Davis, J.W. et al. "Sensor configuration for coverage optimization for surveillance applications." (1 2007).
  • Janoos, F.; Singh, S.; Irfanoglu, O.; Machiraju, R. et al. "Activity analysis using spatio-temporal trajectory volumes in surveillance applications." in IEEE Symposium on Visual Analytics Science and Technology. (1 2007).
  • Janoos, F.; Singh, S.; Irfanoglu, O.; Machiraju, R. et al. "Activity analysis using spatio-temporal trajectory volumes in surveillance applications." (1 2007).
  • Janoos, F.; Machiraju, R.; Parent, R.; Davis, J.W. et al. "Sensor configuration for coverage optimization for surveillance applications." in 9th Videometrics Conference. (1 2007).

2006

  • Kim, Y.; MacHiraju, R.; Thompson, D. "Path-based control of smoke simulations." (9 2006).
  • Mehta, S.; Parthasarathy, S.; Machiraju, R. "On trajectory representation for scientific features." in 6th IEEE International Conference on Data Mining. (1 2006).
  • Mosaliganti, K.; Pan, T.; Sharp, R.; Ridgway, R. et al. "Registration and 3D visualization of large microscopy images." in Medical Imaging 2006 Conference. (1 2006).
  • Mehta, S.; Parthasarathy, S.; Machiraju, R. "Visual exploration of spatio-temporal relationships for scientific data." in IEEE Symposium on Visual Analytics Science and Technology. (1 2006).
  • Mosaliganti,Kishore; Pan,Tony; Sharp,Richard; Ridgway,Randall; Iyengar,Srivathsan; Gulacy,Alexandra; Wenzel,Pamela; de Bruin,Alain; Machiraju,Raghu; Huang,Kun; Leone,Gustavo; Saltz,Joel "Registration and 3D visualization of large microscopy images." in Medical Imaging 2006 Conference. (1 2006).
  • Sharp, R.; Adams, J.; Machiraju, R.; Lee, R. et al. "Simulating transillumination in organic material with near infrared light." (12 2006).
  • Mosaliganti, K.; Pan, T.; Sharp, R.; Ridgway, R. et al. "Registration and 3D visualization of large microscopy images." (1 2006).
  • Mehta, S.; Parthasarathy, S.; Machiraju, R.; Keim, D. "Visual exploration of spatio-temporal relationships for scientific data." (1 2006).
  • Jankun-Kelly, M.; Thompson, D.S.; Brewer, W.; Jiang, M. et al. "A multistage vortex visualization method." (12 2006).
  • Mehta, S.; Parthasarathy, S.; Machlraju, R. "Visual exploration of spatio-temporal relationships for scientific data." (12 2006).
  • Mehta, S.; Parthasarathy, S.; Machiraju, R. "On trajectory representation for scientific features." (1 2006).
  • Mehta, S.; Parthasarathy, S.; Machiraju, R. "On trajectory representation for scientific features." (12 2006).
  • Mosaliganti, K.; Pan, T.; Sharp, R.; Ridgway, R. et al. "Registration and 3D visualization of large microscopy images." (6 2006).

2005

  • Chen, Y.; Lee, J.; Parent, R.; Machiraju, R. "Markerless monocular motion capture using image features and physical constraints." (10 2005).
  • Sharp, R.; Machiraju, R. "A simplified model for inhomogeneous subsurface scattering." (12 2005).
  • Glimcher, L.; Agrawal, G.; Mehta, S.; Jin, R. et al. "Parallelizing a defect detection and categorization application." (12 2005).
  • Sharp, R.; Machiraju, R. "A simplified model for inhomogeneous subsurface scattering." in 4th International Workshop on Volume Graphics. (1 2005).
  • Lee, J.; Moghaddam, B.; Pfister, H.; Machiraju, R. "A bilinear illumination model for robust face recognition." in 10th IEEE International Conference on Computer Vision (ICCV 2005). (1 2005).
  • Mehta, S.; Barr, S.; Choy, T-S.; Yang, H. et al. "Dynamic Classification of Defect Structures in Molecular Dynamics Simulation Data." in 5th SIAM International Conference on Data Mining. (1 2005).
  • Chen, Y.; Lee, J.; Parent, R.; Machiraju, R. "Markerless monocular motion capture using image features and physical constraints." in Computer Graphics International Conference (CGI 2005). (1 2005).
  • Lee, J.; Moghaddam, B.; Pfister, H.; Machiraju, R. et al. "A bilinear illumination model for robust face recognition." (1 2005).
  • Sharp,R; Machiraju,R "A simplified model for inhomogeneous subsurface scattering." in 4th International Workshop on Volume Graphics. (1 2005).
  • Mehta, S.; Barr, S.; Choy, T.S.; Yang, H. et al. "Dynamic classification of defect structures in molecular dynamics simulation data." (12 2005).
  • Mehta, S.; Barr, S.; Choy, T-S.; Yang, H. et al. "Dynamic Classification of Defect Structures in Molecular Dynamics Simulation Data." (1 2005).
  • Lee, J.; Moghaddam, B.; Pfister, H.; Machiraju, R. "A bilinear illumination model for robust face recognition." (12 2005).
  • Sharp, R.; Machiraju, R. "A simplified model for inhomogeneous subsurface scattering." (1 2005).
  • Chen, Y.; Lee, J.; Parent, R.; Machiraju, R. "Markerless monocular motion capture using image features and physical constraints." (1 2005).

2004

  • Scoggins, R.K.; Machiraju, R. "Frequency space techniques for BRDF shading." (1 2004).
  • Kim, Y.; Machiraju, R.; Thompson, D. "Rough interface reconstruction using the level set method." (1 2004).
  • Lee, J.H.; Moghaddam, B.; Pfister, H.; Machiraju, R. "Finding optimal views for 3D face shape modeling." in 6th IEEE International Conference on Automatic Face and Gesture Recognition. (1 2004).
  • Mehta, S.; Hazzard, K.; Machiraju, R.; Parthasarathy, S. et al. "Detection and visualization of anomalous structures in molecular dynamics simulation data." (1 2004).
  • Mehta, S.; Hazzard, K.; Machiraju, R.; Parthasarathy, S. et al. "Detection and visualization of anomalous structures in molecular dynamics simulation data." (12 2004).
  • S. Mehta, A. Choy, S. Barr, K. Hazzard, R. Machiraju, S. Parthasarathy, J. Wilkins Detection and Visualization of Anomalous Structures in Molecular Dynamics Simulation Data. in IEEE Visualization Conference (Vis). http://www.informatik.uni-trier.de/~ley/db/conf/visualization/visualization2004.html#MehtaHMPW04, (1 2004).
  • Lee, J.H.; Moghaddam, B.; Pfister, H.; Machiraju, R. et al. "Finding optimal views for 3D face shape modeling." (1 2004).
  • Kim, Y.; Machiraju, R.; Thompson, D. "Rough interface reconstruction using the level set method." in IEEE Visualization 2004 Conference. (1 2004).
  • Mehta, S.; Hazzard, K.; Machiraju, R.; Parthasarathy, S. et al. "Detection and visualization of anomalous structures in molecular dynamics simulation data." in IEEE Visualization 2004 Conference. (1 2004).
  • Scoggins, R.K.; Machiraju, R. "Frequency space techniques for BRDF shading." in Conference on Targets and Backgrounds X. (1 2004).
  • Lee,J,H; Moghaddam,B; Pfister,H; Machiraju,R "Finding optimal views for 3D face shape modeling." in 6th IEEE International Conference on Automatic Face and Gesture Recognition. (1 2004).
  • Scoggins, R.K.; Machiraju, R. "Frequency space techniques for BRDF shading." (12 2004).
  • Kim, Y.; Machiraju, R.; Thompson, D. "Rough interface reconstruction using the level set method." (12 2004).
  • Lee, J.; Moghaddam, B.; Pfister, H.; Machiraju, R. "Finding optimal views for 3D face shape modeling." (9 2004).

2003

  • Lee, J.; Moghaddam, B.; Pfister, H.; Machiraju, R. "Silhouette-based 3D face shape recovery." in 29th Graphics Interface Conference. (1 2003).
  • M. Jiang, T.-S. Choy, S. Mehta, M. Coatney, S. Barr, K. Hazzard, D. Richie, S. Parthasarathy, R. Machiraju, D. Thompson, J. Wilkins, and B. Gatlin Feature Mining Paradigms for Scientific Data. in SIAM International Conference on Data Mining (SDM'03). http://www.informatik.uni-trier.de/~ley/db/conf/sdm/sdm2003.html#JiangCMCBHRPMTWG03, (1 2003).
  • Jiang, M.; Choy, T.S.; Mehta, S.; Coatney, M. et al. "Feature mining paradigms for scientific data." in 3rd SIAM International Conference on Data Mining. (1 2003).
  • Moghaddam, B.; Lee, J.; Pfister, H.; Machiraju, R. "Model-based 3D face capture with shape-from-silhouettes." in IEEE International Workshop on Analysis and Modeling of Faces and Gestures (AMFG 2003). (1 2003).
  • Kim, Y.; Machiraju, R.; Thompson, D.; SOCIETY, I.C. et al. "Rough surface modeling using surface growth." (1 2003).
  • Lee, J.; Moghaddam, B.; Pfister, H.; Machiraju, R. "Silhouette-based 3D face shape recovery." (1 2003).
  • Machiraju, R.; Johnson, C.; Yoo, T.; Crawfis, R. et al. "Do I really see a bone?." in IEEE Visualization 2003 Conference. (1 2003).
  • Moghaddam,B; Lee,J; Pfister,H; Machiraju,R "Model-based 3D face capture with shape-from-silhouettes." in IEEE International Workshop on Analysis and Modeling of Faces and Gestures (AMFG 2003). (1 2003).
  • Machiraju, R.; Johnson, C.; Yoo, T.; Crawfis, R. et al. "Do I really see a bone?." (1 2003).
  • Kim, Y.; Machiraju, R.; Thompson, D. "Rough surface modeling using surface growth." in International Conference on Shape Modeling International (SMI 2003). (1 2003).
  • Kim, Y.; Machiraju, R.; Thompson, D. "Rough surface modeling using surface growth." (12 2003).
  • Jiang, M.; Choy, T.S.; Mehta, S.; Coatney, M. et al. "Feature mining paradigms for scientific data." (1 2003).
  • Kim,Y; Machiraju,R; Thompson,D "Rough surface modeling using surface growth." in International Conference on Shape Modeling International (SMI 2003). (1 2003).
  • Lee, J.; Moghaddam, B.; Pfister, H.; Machiraju, R. "Silhouette-Based 3D Face Shape Recovery." (12 2003).
  • Moghaddam, B.; Lee, J.; Pfister, H.; Machiraju, R. "Model-based 3D face capture with shape-from-silhouettes." (1 2003).

2002

  • Jiang,M; Machiraju,R; Thompson,D "Geometric verification of swirling features in flow fields." in IEEE Visualization 2002 Eurovis Conference. (1 2002).
  • Jiang, M.; Machiraju, R.; Thompson, D. "Geometric verification of swirling features in flow fields." in IEEE Visualization 2002 Conference. (1 2002).
  • Entezari, A.; Scoggins, R.; Moller, T.; Machiraju, R. "Shading for Fourier Volume Rendering." (1 2002).
  • Polapally, N.K.; Machiraju, R.; Panda, D. "Feature estimation for efficient streaming." in 7th Symposium on Volume Visualization and Graphics. (1 2002).
  • Entezari, A.; Scoggins, R.; Moller, T.; Machiraju, R. "Shading for Fourier Volume Rendering." in 7th Symposium on Volume Visualization and Graphics. (1 2002).
  • Jiang, M.; Machiraju, R.; Thompson, D. "Geometric verification of swirling features in flow fields." (1 2002).
  • Jiang, M.; Machiraju, R.; Thompson, D. "Geometric verification of swirling features in flow fields." (1 2002).
  • Entezari, A.; Scoggins, R.; Möller, T.; Machiraju, R. "Shading for Fourier volume rendering." (1 2002).
  • Kumar Polapally, N.; Machiraju, R.; Panda, D. "Feature estimation for efficient streaming." (1 2002).
  • Polapally, N.K.; Machiraju, R.; Panda, D. "Feature estimation for efficient streaming." (1 2002).
  • Polapally,N,K; Machiraju,R; Panda,D "Feature estimation for efficient streaming." in 7th Symposium on Volume Visualization and Graphics. (1 2002).

2001

  • Tenginakai, S.; Lee, J.; Machiraju, R. "Salient iso-surface detection with model-independent statistical signatures." in IEEE Visualization Conference. (1 2001).
  • Tenginakai, S.; Lee, J.; Machiraju, R. "Salient iso-surface detection with model-independent statistical signatures." (1 2001).
  • Scoggins, R.; Machiraju, R.; Moorhead, R.J. "Approximate shading for the re-illumination of synthetic images." (1 2001).
  • Scoggins,R; Machiraju,R; Moorhead,R,J "Approximate shading for the re-illumination of synthetic images." in IEEE Visualization Conference. (1 2001).
  • Machiraju, R.; Fowler, J.E.; Thompson, D.; Soni, B. et al. "EVITA - Efficient visualization and interrogation of tera-scale data." in Workshop on Mining Scientific Datasets. (1 2001).
  • Scoggins, R.; Machiraju, R.; Moorhead, R.J. "Approximate shading for the re-illumination of synthetic images." (1 2001).
  • Machiraju, R.; Fowler, J.E.; Thompson, D.; Soni, B. et al. "EVITA - Efficient visualization and interrogation of tera-scale data." (1 2001).
  • Scoggins, R.; Machiraju, R.; Moorhead, R.J. "Approximate shading for the re-illumination of synthetic images." in IEEE Visualization Conference. (1 2001).
  • Tenginakai,S; Lee,J; Machiraju,R "Salient iso-surface detection with model-independent statistical signatures." in IEEE Visualization Conference. (1 2001).
  • Tenginakai, S.; Lee, J.; Machiraju, R. "Salient iso-surface detection with model-independent statistical signatures." (1 2001).
  • Machiraju,R; Fowler,J,E; Thompson,D; Soni,B; Schroeder,W "EVITA - Efficient visualization and interrogation of tera-scale data." in Workshop on Mining Scientific Datasets. (1 2001).

2000

  • Scoggins, R.K.; Machiraju, R.; Moorhead, R.J. "Enabling level-of-detail matching for exterior scene synthesis." in IEEE Visualization Conference. (1 2000).
  • Scoggins, R.K.; Machiraju, R.; Moorhead, R.J. "Enabling level-of-detail matching for exterior scene synthesis." (12 2000).
  • Scoggins, R.K.; Machiraju, R.; Moorhead, R.J.; SOCIETY, I.C. et al. "Enabling level-of-detail matching for exterior scene synthesis." (1 2000).

1999

  • Burton, L.C.; Machiraju, R.; Reese, D.S. "Dynamic view-dependent partitioning of structured grids with complex boundaries for object-order rendering techniques." (10 1999).

1998

  • Kompella, N.; Machiraju, R.; Choudhary, A.; Skjellum, A. "Wavelet based compression and denoising of convolution operators." in Conference on Wavelet Applications in Signal and Image Processing VI. (1 1998).
  • Machiraju, R.; Zhu, Z.F.; Fry, B.; Moorhead, R. "Structure-significant representation of structured datasets." (1 1998).
  • Machiraju, R.; Zhu, Z.F.; Fry, B.; Moorhead, R. "Structure-significant representation of structured datasets." in 8th Annual IEEE Conference on Visualization. (4 1998).
  • Kiu, M.H.; Du, X.S.; Moorhead, R.J.; Banks, D.C. et al. "Two dimensional sequence compression using MPEG." (12 1998).
  • Machiraju,R; Zhu,Z,F; Fry,B; Moorhead,R "Structure-significant representation of structured datasets." in 8th Annual IEEE Conference on Visualization. (4 1998).
  • Kompella, N.; Machiraju, R.; Choudhary, A.; Skjellum, A. "Wavelet based compression and denoising of convolution operators." (1 1998).
  • Möller, T.; Mueller, K.; Kurzion, Y.; Machiraju, R. et al. "Design of accurate and smooth filters for function and derivative reconstruction." (10 1998).
  • Kompella, N.; Machiraju, R.; Choudhary, A.; Skjellum, A. "Wavelet based compression and denoising of convolution operators." (12 1998).
  • Moller, T.; Mueller, K.; Kurzion, Y.; Machiraju, R. et al. "Design of accurate and smooth filters for function and derivative reconstruction." (1 1998).
  • Machiraju, R.; Zhu, Z.; Fry, B.; Moorhead, R. "Structure-significant representation of structured datasets." (12 1998).
  • Moller, T.; Mueller, K.; Kurzion, Y.; Machiraju, R. et al. "Design of accurate and smooth filters for function and derivative reconstruction." in IEEE Symposium on Volume Visualization. (1 1998).

1997

  • Gaddipatti, A.; Machiraju, R.; Yagel, R. "Steering image generation with wavelet based perceptual metric." (1 1997).
  • Moller, T.; Machiraju, R.; Mueller, K.; Yagel, R. "Evaluation and design of filters using a Taylor series expansion." (1 1997).
  • Machiraju, R.; Gaddipatti, A.; Yager, R. "Detection and enhancement of scale-coherent structures using wavelet transform products." (12 1997).
  • Zhu, Z.F.; Machiraju, R.; Fry, B.; Moorhead, R. "Wavelet-based multiresolutional representation of computational field simulation datasets." (1 1997).
  • Machiraju, R.; Gaddipatti, A.; Yagel, R. "Detection and enhancement of scale-coherent structures using wavelet transform products." in Conference on Wavelet Applications in Signal and Image Processing V. (1 1997).
  • Moller, T.; Machiraju, R.; Mueller, K.; Yagel, R. "A comparison of normal estimation schemes." (1 1997).
  • Machiraju, R.; Gaddipatti, A.; Yagel, R. "Detection and enhancement of scale-coherent structures using wavelet transform products." (1 1997).
  • Gaddipatti, A.; Machiraju, R.; Yagel, R. "Steering image generation with wavelet based perceptual metric." (12 1997).
  • Moller, T.; Machiraju, R.; Mueller, K.; Yagel, R. "Evaluation and design of filters using a Taylor series expansion." in Meeting of Visualization 96 / Volume Visualization Symposium 96. (4 1997).
  • Kiu, M.H.; Du, X.S.; Moorhead, R.J.; Banks, D.C. et al. "Two dimensional sequence compression using MPEG." (1 1997).
  • Gaddipatti, A.; Machiraju, R.; Yagel, R. "Steering image generation with wavelet based perceptual metric." in 18th Annual Conference of the European-Association-for-Computer-Graphics (Eurographics 97). (1 1997).
  • Machiraju, R.; Vickery, R. "Detection and controlled manipulation of coherent structures in medical images." in 16th Southern Biomedical Engineering Conference. (1 1997).
  • Zhu, Z.F.; Machiraju, R.; Fry, B.; Moorhead, R. "Wavelet-based multiresolutional representation of computational field simulation datasets." in 8th Annual IEEE Conference on Visualization. (1 1997).
  • Moller, T.; Machiraju, R.; Mueller, K.; Yagel, R. "A comparison of normal estimation schemes." in 8th Annual IEEE Conference on Visualization. (1 1997).
  • Kiu, M.H.; Du, X.S.; Moorhead, R.J.; Banks, D.C. et al. "Two dimensional sequence compression using MPEG." in Visual Communications and Image Processing 1998 Conference. (1 1997).
  • Machiraju, R.; Vickery, R. "Detection and controlled manipulation of coherent structures in medical images." (1 1997).

1996

  • Moller, T.; Machiraju, R.; Mueller, K.; Yagel, R. et al. "Classification and local error estimation of interpolation and derivative filters for volume rendering." (1 1996).
  • Moller, T.; Machiraju, R.; Mueller, K.; Yagel, R. "Classification and local error estimation of interpolation and derivative filters for volume rendering." in 1996 Symposium on Volume Visualization. (1 1996).

1995

  • Machiraju, R.; Swan, E.; Yagel, R. "Spatial domain characterization and control of reconstruction errors." in Eurographics Workshop - Rendering Techniques 95. (1 1995).
  • Machiraju, R.; Swan, E.; Yagel, R. "Spatial domain characterization and control of reconstruction errors." (1 1995).