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raghu Machiraju

  • Professor, SBS-Biomedical Informatics
  • Professor, Pathology
  • Professor, Computer Science & Engineering
  • IntDir of Data Analyt Collabor, Translational Data Analytics
  • 779 Dreese Laboratories
    2015 Neil Ave
    Columbus, OH 43210
  • 614-292-6730

Journal Articles

2015

  • Ding H, Wang C, Huang K, Machiraju R., 2015, "GRAPHIE: graph based histology image explorer." . BMC Bioinformatics. 2015 Suppl 11, no. S10, 1186 - 1186.
  • Myers,Emma,M; Bartlett,Christopher,W; Machiraju,Raghu; Bohland,Jason,W, 2015, "An integrative analysis of regional gene expression profiles in the human brain." METHODS 73, 54-70 - 54-70.

2014

  • Yates,A; Webb,A; Sharpnack,M; Chamberlin,H; Huang,K; Machiraju,R, 2014, "Visualizing Multidimensional Data with Glyph SPLOMs." COMPUTER GRAPHICS FORUM 33, no. 3, 301-310 - 301-310.
  • Wang,Chao; Machiraju,Raghu; Huang,Kun, 2014, "Breast cancer patient stratification using a molecular regularized consensus clustering method." METHODS 67, no. 3, 304-312 - 304-312.
  • Li Q, Zachmann G, David F, Huang K, Machiraju R, 2014, "Observing Genomics and Phenotypical Patterns in the Developing Mouse Brain." IEEE Computer Graphics and Applications 4, 88-97 - 88-97.

2013

  • Wang C, Pecot T, Zynger D, Shapiro C, Machiraju R, Huang K, 2013, Identifying Survival Associated Morphological Features of Triple Negative Breast Cancer using Multiple Datasets. Journal of the American Medical Informatics Association : JAMIA. Epub: http://jamia.bmj.com/content/early/2013/04/11/amiajnl-2012-001538, no. NA, NA - NA.
  • Kalluru V, Machiraju R, Huang K., 2013, "Identify condition-specific gene co-expression networks.." Int J Comput Biol Drug Design 6, no. 1-2, 50-59 - 50-59.
  • Wolock,Samuel,L; Yates,Andrew; Petrill,Stephen,A; Bohland,Jason,W; Blair,Clancy; Li,Ning; Machiraju,Raghu; Huang,Kun; Bartlett,Christopher,W, 2013, "Gene X smoking interactions on human brain gene expression: finding common mechanisms in adolescents and adults." JOURNAL OF CHILD PSYCHOLOGY AND PSYCHIATRY 54, no. 10, 1109-1119 - 1109-1119.

2011

  • Janoos, F.; Singh, S.; Machiraju, R.; Wells, W.M. et al., 2011, "State-space models of mental processes from fMRI.." Information processing in medical imaging : proceedings of the ... conference 22, 588-599 - 588-599.
  • Sammet,Steffen; Evans,Kevin,D; Irfanoglu,M,Okan; Strapp,Ashley; Machiraju,Raghu, 2011, "THE FEASIBILITY OF HYBRID AUTOMATIC SEGMENTATION OF AXILLARY LYMPH NODES FROM A 3-D SONOGRAM." ULTRASOUND IN MEDICINE AND BIOLOGY 37, no. 12, 2075-2085 - 2075-2085.
  • Singh, S.; Janoos, F.; Pécot, T.; Caserta, E. et al., 2011, "Identifying nuclear phenotypes using semi-supervised metric learning.." Information processing in medical imaging : proceedings of the ... conference 22, 398-410 - 398-410.
  • Rink,Cameron; Christoforidis,Greg; Khanna,Savita; Peterson,Laura; Patel,Yojan; Khanna,Suchin; Abduljalil,Amir; Irfanoglu,Okan; Machiraju,Raghu; Bergdall,Valerie,K; Sen,Chandan,K, 2011, "Tocotrienol vitamin E protects against preclinical canine ischemic stroke by inducing arteriogenesis." JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM 31, no. 11, 2218-2230 - 2218-2230.

2008

  • Mosaliganti,Kishore; Pan,Tony; Ridgway,Randall; Sharp,Richard; Cooper,Lee; Gulacy,Alex; Sharma,Ashish; Irfanoglu,Okan; Machiraju,Raghu; Kurc,Tahsin; de Bruin,Alain; Wenzel,Pamela; Leone,Gustavo; Saltz,Joel; Huang,Kun, 2008, "An imaging workflow for characterizing phenotypical change in large histological mouse model datasets." JOURNAL OF BIOMEDICAL INFORMATICS 41, no. 6, 863-873 - 863-873.

2007

  • Kaur, R.; Machiraju, R.; Nigam, K.D.P., 2007, "Agitation effects in a gas-liquid-liquid reactor system: Methyl ethyl ketazine production." International Journal of Chemical Reactor Engineering 5,
  • Sharp,Richard,P; Ridgway,Randall; Mosaliganti,Kishore; Wenzel,Pamela; Pan,Tony; de Bruin,Alain; Machiraju,Raghu; Huang,Kun; Leone,Gustavo; Saltz,Joel,H, 2007, "Volume rendering phenotype differences in mouse placenta microscopy data." COMPUTING IN SCIENCE & ENGINEERING 9, no. 1, 38-47 - 38-47.
  • Wenzel,Pamela,L; Wu,Lizhao; de Bruin,Alain; Chong,Jean-Leon; Chen,Wen-Yi; Dureska,Geoffrey; Sites,Emily; Pan,Tony; Sharma,Ashish; Huang,Kun; Ridgway,Randall; Mosaliganti,Kishore; Sharp,Richard; Machiraju,Raghu; Saltz,Joel; Yamamoto,Hideyuki; Cross,James,C; Robinson,Michael,L; Leone,Gustavo, 2007, "Rb is critical in a mammalian tissue stem cell population." GENES & DEVELOPMENT 21, no. 1, 85-97 - 85-97.
  • Mosaliganti,Kishore; Janoos,Firdaus; Sharp,Richard; Ridgway,Randall; Machiraju,Raghu; Huang,Kun; Wenzel,Pamela; deBruin,Alain; Leone,Gustavo; Saltz,Joel, 2007, "Detection and visualization of surface-pockets to enable phenotyping studies." IEEE TRANSACTIONS ON MEDICAL IMAGING 26, no. 9, 1283-1290 - 1283-1290.

Papers in Proceedings

2018

  • Agarwal, M.; Narcisse, D.; Khouzam, N.; Khouzam, R. "Foreword." (2 2018).
  • Agarwal, M.; Narcisse, D.; Khouzam, N.; Khouzam, R. "Foreword." (2 2018).

2016

  • Meng, N.; Machiraju, R.; Huang, K. "Identification of recurrent combinatorial patterns of chromatin modifications at promoters across various tissue types." in 27th International Conference on Genome Informatics - Bioinformatics. (12 2016).
  • Meng, N.; Machiraju, R.; Huang, K. "Identification of recurrent combinatorial patterns of chromatin modifications at promoters across various tissue types.." (12 2016).
  • Meng, N.; Machiraju, R.; Huang, K. "Identification of recurrent combinatorial patterns of chromatin modifications at promoters across various tissue types." (12 2016).
  • Meng, N.; Machiraju, R.; Huang, K. "Identification of recurrent combinatorial patterns of chromatin modifications at promoters across various tissue types.." (12 2016).
  • Meng, N.; Machiraju, R.; Huang, K. "Identification of recurrent combinatorial patterns of chromatin modifications at promoters across various tissue types." (12 2016).

2015

  • Ji, X.; Machiraju, R.; Ritter, A.; Yen, P.Y. "Examining the Distribution, Modularity, and Community Structure in Article Networks for Systematic Reviews." (1 2015).
  • Ji, X.; Machiraju, R.; Ritter, A.; Yen, P-Y. "Examining the Distribution, Modularity, and Community Structure in Article Networks for Systematic Reviews.." (1 2015).
  • Ji, X.; Machiraju, R.; Ritter, A.; Yen, P-Y. "Examining the Distribution, Modularity, and Community Structure in Article Networks for Systematic Reviews.." (1 2015).
  • Ayan Biswas, David Thompson, Wenbin He, Qi Deng, Chun-Ming Chen, Han-Wei Shen, Raghu Machiraju, and Anand Rangarajan "An Uncertainty-Driven Approach to Vortex Analysis Using Oracle Consensus and Spatial Proximity." in Pacific Visualization 2015. (4 2015).
  • Biswas, A.; Thompson, D.; He, W.; Deng, Q. et al. "An Uncertainty-Driven Approach to Vortex Analysis Using Oracle Consensus and Spatial Proximity." (1 2015).
  • *Ji, X.; Machiraju, R.; Ritter, A.; Yen, P-Y. "Examining the Distribution, Modularity, and Community Structure in Article Networks for Systematic Reviews." in AMIA. (1 2015).
  • Ji, X.; Machiraju, R.; Ritter, A.; Yen, P-Y. "Examining the Distribution, Modularity, and Community Structure in Article Networks for Systematic Reviews.." (1 2015).
  • Biswas, A.; Thompson, D.; He, W.; Deng, Q. et al. "An uncertainty-driven approach to vortex analysis using oracle consensus and spatial proximity." (1 2015).
  • Biswas, A.; Thompson, D.; He, W.; Deng, Q. et al. "An Uncertainty-Driven Approach to Vortex Analysis Using Oracle Consensus and Spatial Proximity." in IEEE Pacific Visualization Symposium (PacificVis). (1 2015).

2014

  • Wang C, Machiraju R, Huang K "Cancer Patient Integrative Stratification via a Two-step Consensus Clustering of Molecular Expression and Clinical Attributes.." in 2014 AMIA (American Medical Informatics Association) Summit on Translational Bioinformatics,. (4 2014).
  • Zhang, L.; Machiraju, R.; Thompson, D.; Rangarajan, A. et al. "Adaptive boosting for enhanced vortex visualization." (1 2014).

2013

  • Park, D.Y.; Jones, D.; Moldovan, N.I.; Machiraju, R. et al. "Robust detection and visualization of cytoskeletal structures in fibrillar scaffolds from 3-dimensional confocal image." (1 2013).
  • Zhang, L.; Machiraju, R.; Thompson, D. "CAVIAR-based vortex core region detection." (1 2013).
  • Zhang, L.; Machiraju, R.; Thompson, D.; IEEE, "CAVIAR-Based Vortex Core Region Detection." (1 2013).
  • Park D-Y, Jones D, Moldovan N, Machiraju R, Pécot T "Robust Detection and Visualization of 
Cytoskeletal Structures in Fibrillar Scaffolds from 3-Dimensional Confocal Images." in IEEE Symposium 
on Biological Data Visualization (BioVis) 2013,. (10 2013).
  • Park, D.Y.; Jones, D.; Moldovan, N.I.; Machiraju, R. et al. "Robust Detection and Visualization of Cytoskeletal Structures in Fibrillar Scaffolds from 3-Dimensional Confocal Image." in IEEE Symposium on Biological Data Visualization. (1 2013).
  • Park, D.Y.; Jones, D.; Moldovan, N.I.; Machiraju, R. et al. "Robust Detection and Visualization of Cytoskeletal Structures in Fibrillar Scaffolds from 3-Dimensional Confocal Image." (1 2013).
  • Zhang, L.; Machiraju, R.; Thompson, D. "CAVIAR-Based Vortex Core Region Detection." in 13th International Conference on Computer-Aided Design and Computer Graphics (CAD/Graphics). (1 2013).

2012

  • Machiraju, R.; Singh, S.; Pecot, T.; Huang, K. et al. "Quantitative Cellular Phenotyping in Tissue Microenvironments." in Experimental Biology Meeting. (4 2012).
  • Pecot,Thierry; Singh,Shantanu; Caserta,Enrico; Huang,Kun; Machiraju,Raghu; Leone,Gustavo "NON PARAMETRIC CELL NUCLEI SEGMENTATION BASED ON A TRACKING OVER DEPTH FROM 3D FLUORESCENCE CONFOCAL IMAGES." in 9th IEEE International Symposium on Biomedical Imaging (ISBI) - From Nano to Macro. (1 2012).
  • Han,Zhi; Tian,Lu; Pecot,Thierry; Huang,Tim; Machiraju,Raghu; Huang,Kun "A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data." in 1st Annual Meeting of the Great Lakes Bioinformatics (GLBIO). (3 2012).
  • Han, Z.; Tian, L.; Pécot, T.; Huang, T. et al. "A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data.." (3 2012).
  • Han, Z.; Tian, L.; Pecot, T.; Huang, T. et al. "A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data." in 1st Annual Meeting of the Great Lakes Bioinformatics (GLBIO). (3 2012).
  • Pecot, T.; Singh, S.; Caserta, E.; Huang, K. et al. "Non parametric cell nuclei segmentation based on a tracking over depth from 3D fluorescence confocal images." (8 2012).
  • Zhang, L.; Meng, X.; Machiraju, R.; Thompson, D. "Distance measure in vortex visualization." (10 2012).
  • Han, Z.; Tian, L.; Pécot, T.; Huang, T. et al. "A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data.." (12 2012).
  • Han, Z.; Tian, L.; Pécot, T.; Huang, T. et al. "A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data." (1 2012).
  • Pecot, T.; Singh, S.; Caserta, E.; Huang, K. et al. "NON PARAMETRIC CELL NUCLEI SEGMENTATION BASED ON A TRACKING OVER DEPTH FROM 3D FLUORESCENCE CONFOCAL IMAGES." in 9th IEEE International Symposium on Biomedical Imaging (ISBI) - From Nano to Macro. (1 2012).
  • Han, Z.; Tian, L.; Pécot, T.; Huang, T. et al. "A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data.." (3 2012).
  • Machiraju, R.; Singh, S.; Pecot, T.; Huang, K. et al. "Quantitative Cellular Phenotyping in Tissue Microenvironments." (4 2012).
  • Pecot, T.; Singh, S.; Caserta, E.; Huang, K. et al. "NON PARAMETRIC CELL NUCLEI SEGMENTATION BASED ON A TRACKING OVER DEPTH FROM 3D FLUORESCENCE CONFOCAL IMAGES." (1 2012).
  • Han, Z.; Tian, L.; Pecot, T.; Huang, T. et al. "A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data." (3 2012).

2011

  • Irfanoglu, M.O.; Walker, L.; Sammet, S.; Pierpaoli, C. et al. "Susceptibility distortion correction for echo planar images with non-uniform B-spline grid sampling: A diffusion tensor image study." (10 2011).
  • Irfanoglu,M,O; Walker,L; Sammet,S; Pierpaoli,C; Machiraju,R "Susceptibility Distortion Correction for Echo Planar Images with Non-uniform B-Spline Grid Sampling: A Diffusion Tensor Image Study." in 14th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2011). (9 2011).
  • Singh,Shantanu; Janoos,Firdaus; Pecot,Thierry; Caserta,Enrico; Leone,Gustavo; Rittscher,Jens; Machiraju,Raghu "Identifying Nuclear Phenotypes Using Semi-supervised Metric Learning." in 22nd International Conference on Information Processing in Medical Imaging (IPMI). (1 2011).
  • Singh, S.; Janoos, F.; Pécot, T.; Caserta, E. et al. "Non-parametric population analysis of cellular phenotypes." (10 2011).
  • Singh,Shantanu; Janoos,Firdaus; Pecot,Thierry; Caserta,Enrico; Huang,Kun; Rittscher,Jens; Leone,Gustavo; Machiraju,Raghu "Non-parametric Population Analysis of Cellular Phenotypes." in 14th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2011). (9 2011).
  • Janoos,Firdaus; Singh,Shantanu; Machiraju,Raghu; Wells,William,M; Morocz,Istvan,A "State-Space Models of Mental Processes from fMRI." in 22nd International Conference on Information Processing in Medical Imaging (IPMI). (7 2011).

2010

  • Janoos F, Irfanoglu O, Afacan O, Machiraju R, Warfield S, Wald L, Morocz I "Brain State Identification from fMRI Using Unsupervised Learning." in Proceedings of Human Brain Mapping. (1 2010).
  • Mosaliganti, K.; Janoos, F.; Gelas, A.; Noche, R. et al. "Anisotropic plate diffusion filtering for detection of cell membranes in 3D microscopy images." (8 2010).
  • Mosaliganti K, Janoos F, Gelas A, Noche R, Obholzer N, Machiraju R, Megason S "Anisotropic Plate Diffusion Filtering for Detection of Cell Membranes in 3D Microscopy Images." in The IEEE International Symposium on Biomedical Imaging (ISBI) 2010. (4 2010).
  • Janoos, F.; Machiraju, R.; Morocz, I.A. "Decoding brain states from fMRI data." in 15th World Congress of Psychophysiology. (9 2010).
  • Sammet,S; Irfanoglu,O; Koch,R; Schmalbrock,P; Choi,S; Machiraju,R; Yuh,W; Knopp,M "Diffusion Tensor Imaging and Fibertracking at 7T." in 110th Annual Meeting of the American-Roentgen-Ray-Society. (5 2010).
  • F.Janoos, R. Machiraju, S. Sammet, M.V. Knopp and I.A. Morocz "Unsupervised Learning of Brain States from fMRI Data." in 3th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI) Conference, 2010. (1 2010).
  • Singh, S.; Raman, S.; Caserta, E.; Leone, G. et al. "Analysis of spatial variation of nuclear morphology in tissue microenvironments." (8 2010).
  • Irfanoglu M, Koay G, Basser P, Machiraju R "Diffusion Tensor Field Registration in the Presence of Uncertainty." in Medical Image Computing and Computer Assisted Intervention Conference (MICCAI) 2009. (1 2010).
  • Janoos,Firdaus; Machiraju,Raghu; Morocz,Istvan,A "Decoding brain states from fMRI data." in 15th World Congress of Psychophysiology. (9 2010).
  • Singh S, Raman S, Caserta E, Leone G, Ostrowski M, Rittscher J, Machiraju R "Analysis of Spatial Variation of Nuclear Morphology in Tissue Microenviroments." in International Symposium on Biological Imaging, Rotterdam, The Netherlands, April 2010 (to appear).. (1 2010).
  • Singh, S.; Raman, S.; Caserta, E.; Leone, G. et al. "ANALYSIS OF SPATIAL VARIATION OF NUCLEAR MORPHOLOGY IN TISSUE MICROENVIRONMENTS." (1 2010).
  • Singh, S.; Raman, S.; Caserta, E.; Leone, G. et al. "ANALYSIS OF SPATIAL VARIATION OF NUCLEAR MORPHOLOGY IN TISSUE MICROENVIRONMENTS." in 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro. (1 2010).
  • Singh,S; Raman,S; Caserta,E; Leone,G; Ostrowski,M; Rittscher,J; Machiraju,R "ANALYSIS OF SPATIAL VARIATION OF NUCLEAR MORPHOLOGY IN TISSUE MICROENVIRONMENTS." in 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro. (1 2010).
  • Janoos,Firdaus; Machiraju,Raghu; Sammet,Steffen; Knopp,Michael,V; Warfield,Simon,K; Morocz,Istvan,Akos "Measuring Effects of Latency in Brain Activity with FMRI." in 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro. (1 2010).
  • Janoos, F.; Machiraju, R.; Morocz, I.A. "Decoding brain states from fMRI data." (9 2010).
  • Mosaliganti, K.; Janoos, F.; Gelas, A.; Noche, R. et al. "ANISOTROPIC PLATE DIFFUSION FILTERING FOR DETECTION OF CELL MEMBRANES IN 3D MICROSCOPY IMAGES." in 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro. (1 2010).
  • Mosaliganti, K.; Janoos, F.; Gelas, A.; Noche, R. et al. "ANISOTROPIC PLATE DIFFUSION FILTERING FOR DETECTION OF CELL MEMBRANES IN 3D MICROSCOPY IMAGES.." (1 2010).
  • Botha, C.; Hornegger, J.; Machiraju, R.; Wiebel, A. et al. "Foreword." (12 2010).
  • Mosaliganti, K.; Janoos, F.; Gelas, A.; Noche, R. et al. "ANISOTROPIC PLATE DIFFUSION FILTERING FOR DETECTION OF CELL MEMBRANES IN 3D MICROSCOPY IMAGES.." (1 2010).
  • Mosaliganti, K.; Janoos, F.; Gelas, A.; Noche, R. et al. "ANISOTROPIC PLATE DIFFUSION FILTERING FOR DETECTION OF CELL MEMBRANES IN 3D MICROSCOPY IMAGES." (1 2010).

2009

  • Janoos, F.; Mosaliganti, K.; Xu, X.; Machiraju, R. et al. "Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging." (2 2009).
  • Janoos, F.; Mosaliganti, K.; Xu, X.; Machiraju, R. et al. "Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging." (2 2009).
  • Janoos, F.; Mosaliganti, K.; Xu, X.; Machiraju, R. et al. "Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging.." (2 2009).
  • Irfanoglu, M.O.; Koay, C.G.; Pajevic, S.; Machiraju, R. et al. "Diffusion tensor field registration in the presence of uncertainty." (12 2009).
  • Janoos,Firdaus; Nouanesengsy,Boonthanome; Machiraju,Raghu; Shen,Han,Wei; Sammet,Steffen; Knopp,Michael; Morocz,Istvan,A "Visual Analysis of Brain Activity from fMRI Data." in 11th Eurographics/IEEE VGTC Symposium on Visualization (EuroVis 09). (6 2009).
  • Janoos, F.; Mosaliganti, K.; Xu, X.; Machiraju, R. et al. "Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging.." (2 2009).
  • Janoos,Firdaus; Mosaliganti,Kishore; Xu,Xiaoyin; Machiraju,Raghu; Huang,Kun; Wong,Stephen,TC "Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging." in 1st International Workshop on Microscopy Image Analysis with Applications to Biology. (2 2009).
  • Janoos, F.; Mosaliganti, K.; Xu, X.; Machiraju, R. et al. "Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging." in 1st International Workshop on Microscopy Image Analysis with Applications to Biology. (2 2009).

2008

  • Janoos, F.; Nouansengsy, B.; Xu, X.; MacHiraju, R. et al. "Classification and uncertainty visualization of dendritic spines from optical microscopy imaging." (5 2008).
  • Mosaliganti, K.; Machiraju, R.; Huang, K. "Geometry-driven visualization of microscopic structures in biology." (9 2008).
  • Singh, S.; Mosaliganti, K.; Machiraju, R.; IEEE, "Microstructure preserving synthesis of biomedical images." (1 2008).
  • Mosaliganti, K.; Machiraju, R.; Huang, K.; IEEE, "Geometry-driven visualization of microscopic structures in biology." (1 2008).
  • Mosaliganti,K; Machiraju,R; Huang,K "Geometry-driven visualization of microscopic structures in biology." in 5th IEEE International Symposium on Biomedical Imaging. (4 2008).
  • Janoos, F.; Nouansengsy, B.; Xu, X.; Machiraju, R. et al. "Classification and uncertainty visualization of dendritic spines from optical microscopy imaging." (5 2008).
  • Singh, S.; Mosaliganti, K.; Machiraju, R. "Microstructure preserving synthesis of biomedical images." in 5th IEEE International Symposium on Biomedical Imaging. (1 2008).
  • Jankun-Kelly, M.; Thompson, D.; Jiang, M.; Shannahan, B. et al. "Vortex characterization for engineering applications." (12 2008).
  • Singh, S.; Mosaliganti, K.; Machiraju, R. "Microstructure preserving synthesis of biomedical images." (9 2008).
  • Mosaliganti, K.; Machiraju, R.; Huang, K. "Geometry-driven visualization of microscopic structures in biology." in 5th IEEE International Symposium on Biomedical Imaging. (1 2008).
  • Janoos, F.; Nouansengsy, B.; Xu, X.; Machiraju, R. et al. "Classification and uncertainty visualization of dendritic spines from optical microscopy imaging." in 10th Eurographics/IEEE VGTC Symposium on Visualization (EuroVis 08). (5 2008).

2007

  • Janoos, F.; Singh, S.; Irfanoglu, O.; Machiraju, R. et al. "Activity analysis using spatio-temporal trajectory volumes in surveillance applications." in IEEE Symposium on Visual Analytics Science and Technology. (1 2007).
  • Janoos, F.; Singh, S.; Irfanoglu, O.; Machiraju, R. et al. "Activity analysis using spatio-temporal trajectory volumes in surveillance applications." (1 2007).
  • Janoos, F.; Singh, S.; Irfanoglu, O.; Machiraju, R. et al. "Activity analysis using spatio-temporal trajectory volumes in surveillance applications." (12 2007).
  • Janoos, F.; Machiraju, R.; Parent, R.; Davis, J.W. et al. "Sensor configuration for coverage optimization for surveillance applications." (5 2007).
  • Janoos, F.; Machiraju, R.; Parent, R.; Davis, J.W. et al. "Sensor configuration for coverage optimization for surveillance applications." in 9th Videometrics Conference. (1 2007).
  • Janoos, F.; Machiraju, R.; Parent, R.; Davis, J.W. et al. "Sensor configuration for coverage optimization for surveillance applications." (1 2007).

2006

  • Kim, Y.; MacHiraju, R.; Thompson, D. "Path-based control of smoke simulations." (9 2006).
  • Jankun-Kelly, M.; Thompson, D.S.; Brewer, W.; Jiang, M. et al. "A multistage vortex visualization method." (12 2006).
  • Mosaliganti, K.; Pan, T.; Sharp, R.; Ridgway, R. et al. "Registration and 3D visualization of large microscopy images." (1 2006).
  • Sharp, R.; Adams, J.; Machiraju, R.; Lee, R. et al. "Simulating transillumination in organic material with near infrared light." (12 2006).
  • Mosaliganti, K.; Pan, T.; Sharp, R.; Ridgway, R. et al. "Registration and 3D visualization of large microscopy images." (6 2006).
  • Mosaliganti, K.; Pan, T.; Sharp, R.; Ridgway, R. et al. "Registration and 3D visualization of large microscopy images." in Medical Imaging 2006 Conference. (1 2006).
  • Mosaliganti,Kishore; Pan,Tony; Sharp,Richard; Ridgway,Randall; Iyengar,Srivathsan; Gulacy,Alexandra; Wenzel,Pamela; de Bruin,Alain; Machiraju,Raghu; Huang,Kun; Leone,Gustavo; Saltz,Joel "Registration and 3D visualization of large microscopy images." in Medical Imaging 2006 Conference. (1 2006).

2005

  • Sharp, R.; Machiraju, R. "A simplified model for inhomogeneous subsurface scattering." (1 2005).
  • Chen, Y.; Lee, J.; Parent, R.; Machiraju, R. "Markerless monocular motion capture using image features and physical constraints." (1 2005).
  • Sharp,R; Machiraju,R "A simplified model for inhomogeneous subsurface scattering." in 4th International Workshop on Volume Graphics. (1 2005).
  • Chen, Y.; Lee, J.; Parent, R.; Machiraju, R. "Markerless monocular motion capture using image features and physical constraints." in Computer Graphics International Conference (CGI 2005). (1 2005).
  • Lee, J.; Moghaddam, B.; Pfister, H.; Machiraju, R. "A bilinear illumination model for robust face recognition." in 10th IEEE International Conference on Computer Vision (ICCV 2005). (1 2005).
  • Chen, Y.; Lee, J.; Parent, R.; Machiraju, R. "Markerless monocular motion capture using image features and physical constraints." (10 2005).
  • Sharp, R.; Machiraju, R. "A simplified model for inhomogeneous subsurface scattering." in 4th International Workshop on Volume Graphics. (1 2005).
  • Lee, J.; Moghaddam, B.; Pfister, H.; Machiraju, R. "A bilinear illumination model for robust face recognition." (12 2005).
  • Lee, J.; Moghaddam, B.; Pfister, H.; Machiraju, R. et al. "A bilinear illumination model for robust face recognition." (1 2005).
  • Glimcher, L.; Agrawal, G.; Mehta, S.; Jin, R. et al. "Parallelizing a defect detection and categorization application." (12 2005).
  • Sharp, R.; Machiraju, R. "A simplified model for inhomogeneous subsurface scattering." (12 2005).

2004

  • Lee,J,H; Moghaddam,B; Pfister,H; Machiraju,R "Finding optimal views for 3D face shape modeling." in 6th IEEE International Conference on Automatic Face and Gesture Recognition. (1 2004).
  • Kim, Y.; Machiraju, R.; Thompson, D. "Rough interface reconstruction using the level set method." in IEEE Visualization 2004 Conference. (1 2004).
  • Lee, J.H.; Moghaddam, B.; Pfister, H.; Machiraju, R. "Finding optimal views for 3D face shape modeling." in 6th IEEE International Conference on Automatic Face and Gesture Recognition. (1 2004).
  • Scoggins, R.K.; Machiraju, R. "Frequency space techniques for BRDF shading." in Conference on Targets and Backgrounds X. (1 2004).
  • Kim, Y.; Machiraju, R.; Thompson, D. "Rough interface reconstruction using the level set method." (12 2004).
  • Scoggins, R.K.; Machiraju, R. "Frequency space techniques for BRDF shading." (1 2004).
  • Scoggins, R.K.; Machiraju, R. "Frequency space techniques for BRDF shading." (12 2004).
  • Lee, J.; Moghaddam, B.; Pfister, H.; Machiraju, R. "Finding optimal views for 3D face shape modeling." (9 2004).
  • Kim, Y.; Machiraju, R.; Thompson, D. "Rough interface reconstruction using the level set method." (1 2004).
  • Lee, J.H.; Moghaddam, B.; Pfister, H.; Machiraju, R. et al. "Finding optimal views for 3D face shape modeling." (1 2004).

2003

  • Lee, J.; Moghaddam, B.; Pfister, H.; Machiraju, R. "Silhouette-based 3D face shape recovery." (1 2003).
  • Machiraju, R.; Johnson, C.; Yoo, T.; Crawfis, R. et al. "Do I really see a bone?." in IEEE Visualization 2003 Conference. (1 2003).
  • Kim, Y.; Machiraju, R.; Thompson, D. "Rough surface modeling using surface growth." in International Conference on Shape Modeling International (SMI 2003). (1 2003).
  • Lee, J.; Moghaddam, B.; Pfister, H.; Machiraju, R. "Silhouette-Based 3D Face Shape Recovery." (12 2003).
  • Kim, Y.; Machiraju, R.; Thompson, D.; SOCIETY, I.C. et al. "Rough surface modeling using surface growth." (1 2003).
  • Moghaddam,B; Lee,J; Pfister,H; Machiraju,R "Model-based 3D face capture with shape-from-silhouettes." in IEEE International Workshop on Analysis and Modeling of Faces and Gestures (AMFG 2003). (1 2003).
  • Moghaddam, B.; Lee, J.; Pfister, H.; Machiraju, R. "Model-based 3D face capture with shape-from-silhouettes." (1 2003).
  • Kim,Y; Machiraju,R; Thompson,D "Rough surface modeling using surface growth." in International Conference on Shape Modeling International (SMI 2003). (1 2003).
  • Moghaddam, B.; Lee, J.; Pfister, H.; Machiraju, R. "Model-based 3D face capture with shape-from-silhouettes." in IEEE International Workshop on Analysis and Modeling of Faces and Gestures (AMFG 2003). (1 2003).
  • Machiraju, R.; Johnson, C.; Yoo, T.; Crawfis, R. et al. "Do I really see a bone?." (1 2003).
  • Lee, J.; Moghaddam, B.; Pfister, H.; Machiraju, R. "Silhouette-based 3D face shape recovery." in 29th Graphics Interface Conference. (1 2003).
  • Kim, Y.; Machiraju, R.; Thompson, D. "Rough surface modeling using surface growth." (12 2003).

2002

  • Polapally, N.K.; Machiraju, R.; Panda, D. "Feature estimation for efficient streaming." in 7th Symposium on Volume Visualization and Graphics. (1 2002).
  • Jiang, M.; Machiraju, R.; Thompson, D. "Geometric verification of swirling features in flow fields." (1 2002).
  • Jiang, M.; Machiraju, R.; Thompson, D. "Geometric verification of swirling features in flow fields." in IEEE Visualization 2002 Conference. (1 2002).
  • Entezari, A.; Scoggins, R.; Moller, T.; Machiraju, R. "Shading for Fourier Volume Rendering." (1 2002).
  • Kumar Polapally, N.; Machiraju, R.; Panda, D. "Feature estimation for efficient streaming." (1 2002).
  • Entezari, A.; Scoggins, R.; Moller, T.; Machiraju, R. "Shading for Fourier Volume Rendering." in 7th Symposium on Volume Visualization and Graphics. (1 2002).
  • Polapally, N.K.; Machiraju, R.; Panda, D. "Feature estimation for efficient streaming." (1 2002).
  • Jiang, M.; Machiraju, R.; Thompson, D. "Geometric verification of swirling features in flow fields." (1 2002).
  • Jiang,M; Machiraju,R; Thompson,D "Geometric verification of swirling features in flow fields." in IEEE Visualization 2002 Eurovis Conference. (1 2002).
  • Polapally,N,K; Machiraju,R; Panda,D "Feature estimation for efficient streaming." in 7th Symposium on Volume Visualization and Graphics. (1 2002).
  • Entezari, A.; Scoggins, R.; Möller, T.; Machiraju, R. "Shading for Fourier volume rendering." (1 2002).

2001

  • Scoggins, R.; Machiraju, R.; Moorhead, R.J. "Approximate shading for the re-illumination of synthetic images." in IEEE Visualization Conference. (1 2001).
  • Machiraju, R.; Fowler, J.E.; Thompson, D.; Soni, B. et al. "EVITA - Efficient visualization and interrogation of tera-scale data." in Workshop on Mining Scientific Datasets. (1 2001).
  • Tenginakai, S.; Lee, J.; Machiraju, R. "Salient iso-surface detection with model-independent statistical signatures." in IEEE Visualization Conference. (1 2001).
  • Scoggins, R.; Machiraju, R.; Moorhead, R.J. "Approximate shading for the re-illumination of synthetic images." (1 2001).
  • Tenginakai,S; Lee,J; Machiraju,R "Salient iso-surface detection with model-independent statistical signatures." in IEEE Visualization Conference. (1 2001).
  • Machiraju, R.; Fowler, J.E.; Thompson, D.; Soni, B. et al. "EVITA - Efficient visualization and interrogation of tera-scale data." (1 2001).
  • Scoggins,R; Machiraju,R; Moorhead,R,J "Approximate shading for the re-illumination of synthetic images." in IEEE Visualization Conference. (1 2001).
  • Scoggins, R.; Machiraju, R.; Moorhead, R.J. "Approximate shading for the re-illumination of synthetic images." (1 2001).
  • Tenginakai, S.; Lee, J.; Machiraju, R. "Salient iso-surface detection with model-independent statistical signatures." (1 2001).
  • Machiraju,R; Fowler,J,E; Thompson,D; Soni,B; Schroeder,W "EVITA - Efficient visualization and interrogation of tera-scale data." in Workshop on Mining Scientific Datasets. (1 2001).
  • Tenginakai, S.; Lee, J.; Machiraju, R. "Salient iso-surface detection with model-independent statistical signatures." (1 2001).

2000

  • Scoggins, R.K.; Machiraju, R.; Moorhead, R.J. "Enabling level-of-detail matching for exterior scene synthesis." (12 2000).
  • Scoggins, R.K.; Machiraju, R.; Moorhead, R.J.; SOCIETY, I.C. et al. "Enabling level-of-detail matching for exterior scene synthesis." (1 2000).
  • Scoggins, R.K.; Machiraju, R.; Moorhead, R.J. "Enabling level-of-detail matching for exterior scene synthesis." in IEEE Visualization Conference. (1 2000).

1999

  • Burton, L.C.; Machiraju, R.; Reese, D.S. "Dynamic view-dependent partitioning of structured grids with complex boundaries for object-order rendering techniques." (10 1999).

1998

  • Kiu, M.H.; Du, X.S.; Moorhead, R.J.; Banks, D.C. et al. "Two dimensional sequence compression using MPEG." (12 1998).
  • Machiraju,R; Zhu,Z,F; Fry,B; Moorhead,R "Structure-significant representation of structured datasets." in 8th Annual IEEE Conference on Visualization. (4 1998).
  • Machiraju, R.; Zhu, Z.F.; Fry, B.; Moorhead, R. "Structure-significant representation of structured datasets." (1 1998).
  • Möller, T.; Mueller, K.; Kurzion, Y.; Machiraju, R. et al. "Design of accurate and smooth filters for function and derivative reconstruction." (10 1998).
  • Kompella, N.; Machiraju, R.; Choudhary, A.; Skjellum, A. "Wavelet based compression and denoising of convolution operators." (12 1998).
  • Kompella, N.; Machiraju, R.; Choudhary, A.; Skjellum, A. "Wavelet based compression and denoising of convolution operators." (1 1998).
  • Moller, T.; Mueller, K.; Kurzion, Y.; Machiraju, R. et al. "Design of accurate and smooth filters for function and derivative reconstruction." (1 1998).
  • Machiraju, R.; Zhu, Z.F.; Fry, B.; Moorhead, R. "Structure-significant representation of structured datasets." in 8th Annual IEEE Conference on Visualization. (4 1998).
  • Kompella, N.; Machiraju, R.; Choudhary, A.; Skjellum, A. "Wavelet based compression and denoising of convolution operators." in Conference on Wavelet Applications in Signal and Image Processing VI. (1 1998).
  • Machiraju, R.; Zhu, Z.; Fry, B.; Moorhead, R. "Structure-significant representation of structured datasets." (12 1998).
  • Moller, T.; Mueller, K.; Kurzion, Y.; Machiraju, R. et al. "Design of accurate and smooth filters for function and derivative reconstruction." in IEEE Symposium on Volume Visualization. (1 1998).

1997

  • Zhu, Z.F.; Machiraju, R.; Fry, B.; Moorhead, R. "Wavelet-based multiresolutional representation of computational field simulation datasets." in 8th Annual IEEE Conference on Visualization. (1 1997).
  • Machiraju, R.; Gaddipatti, A.; Yagel, R. "Detection and enhancement of scale-coherent structures using wavelet transform products." (1 1997).
  • Moller, T.; Machiraju, R.; Mueller, K.; Yagel, R. "A comparison of normal estimation schemes." (1 1997).
  • Moller, T.; Machiraju, R.; Mueller, K.; Yagel, R. "Evaluation and design of filters using a Taylor series expansion." (1 1997).
  • Gaddipatti, A.; Machiraju, R.; Yagel, R. "Steering image generation with wavelet based perceptual metric." in 18th Annual Conference of the European-Association-for-Computer-Graphics (Eurographics 97). (1 1997).
  • Machiraju, R.; Vickery, R. "Detection and controlled manipulation of coherent structures in medical images." in 16th Southern Biomedical Engineering Conference. (1 1997).
  • Gaddipatti, A.; Machiraju, R.; Yagel, R. "Steering image generation with wavelet based perceptual metric." (12 1997).
  • Machiraju, R.; Gaddipatti, A.; Yager, R. "Detection and enhancement of scale-coherent structures using wavelet transform products." (12 1997).
  • Gaddipatti, A.; Machiraju, R.; Yagel, R. "Steering image generation with wavelet based perceptual metric." (1 1997).
  • Zhu, Z.F.; Machiraju, R.; Fry, B.; Moorhead, R. "Wavelet-based multiresolutional representation of computational field simulation datasets." (1 1997).
  • Moller, T.; Machiraju, R.; Mueller, K.; Yagel, R. "Evaluation and design of filters using a Taylor series expansion." in Meeting of Visualization 96 / Volume Visualization Symposium 96. (4 1997).
  • Machiraju, R.; Gaddipatti, A.; Yagel, R. "Detection and enhancement of scale-coherent structures using wavelet transform products." in Conference on Wavelet Applications in Signal and Image Processing V. (1 1997).
  • Kiu, M.H.; Du, X.S.; Moorhead, R.J.; Banks, D.C. et al. "Two dimensional sequence compression using MPEG." in Visual Communications and Image Processing 1998 Conference. (1 1997).
  • Moller, T.; Machiraju, R.; Mueller, K.; Yagel, R. "A comparison of normal estimation schemes." in 8th Annual IEEE Conference on Visualization. (1 1997).
  • Kiu, M.H.; Du, X.S.; Moorhead, R.J.; Banks, D.C. et al. "Two dimensional sequence compression using MPEG." (1 1997).
  • Machiraju, R.; Vickery, R. "Detection and controlled manipulation of coherent structures in medical images." (1 1997).

1996

  • Moller, T.; Machiraju, R.; Mueller, K.; Yagel, R. "Classification and local error estimation of interpolation and derivative filters for volume rendering." in 1996 Symposium on Volume Visualization. (1 1996).
  • Moller, T.; Machiraju, R.; Mueller, K.; Yagel, R. et al. "Classification and local error estimation of interpolation and derivative filters for volume rendering." (1 1996).

1995

  • Machiraju, R.; Swan, E.; Yagel, R. "Spatial domain characterization and control of reconstruction errors." in Eurographics Workshop - Rendering Techniques 95. (1 1995).
  • Machiraju, R.; Swan, E.; Yagel, R. "Spatial domain characterization and control of reconstruction errors." (1 1995).